WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE48430 Name  PTRN-1, isoform a
Molecular Weight (kDa)  125.4 Length  1110
Organism  Caenorhabditis elegans MD5 Checksum  05848a92d3e20dc804e0f8e754215998
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1110
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F35B3.5a F35B3.5a 3333   X: 17022269-17022410

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

15 Motifs

WormBase ID
PFSCAN:PS50021
INTERPRO:IPR036872
SUPERFAMILY:SSF47576
HMMPANTHER:PTHR21595
PFSCAN:PS51508
SMART:SM01051
PhosphoPep:F35B3.5a
INTERPRO:IPR014797
INTERPRO:IPR022613
INTERPRO:IPR032940
INTERPRO:IPR038209
PFAM:PF08683
PFAM:PF11971
SUPERFAMILY:SSF50346
INTERPRO:IPR011033