WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE48546 Name  CLEC-78
Molecular Weight (kDa)  383.4 Length  3514
Organism  Caenorhabditis elegans MD5 Checksum  2d1ab6b7930d27c3ee9f405c35c1e911
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
3514
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F47C12.2 F47C12.2 10545   IV: 3989132-3989212

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

56 Motifs

WormBase ID
SCANPROSITE:PS01186
SUPERFAMILY:SSF57196
PFSCAN:PS50026
SCANPROSITE:PS01187
SMART:SM00179
PFAM:PF07645
SMART:SM00181
INTERPRO:IPR000742
SCANPROSITE:PS00010
INTERPRO:IPR001881
INTERPRO:IPR013320
SUPERFAMILY:SSF49899
SUPERFAMILY:SSF56436
INTERPRO:IPR001304
INTERPRO:IPR016186
PFSCAN:PS50041
SMART:SM00034
INTERPRO:IPR016187
PFSCAN:PS50022
SUPERFAMILY:SSF49785
INTERPRO:IPR008979
INTERPRO:IPR000421
SCANPROSITE:PS00022
INTERPRO:IPR036055
PFSCAN:PS50068
SCANPROSITE:PS01209
SUPERFAMILY:SSF57424
PFAM:PF00057
INTERPRO:IPR002172
SMART:SM00192