WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE44075 Name  NID-1, isoform b
Molecular Weight (kDa)  168.4 Length  1527
Organism  Caenorhabditis elegans MD5 Checksum  88dd0ff32fc35ebda180d0a3c005d5f5
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1527
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F54F3.1b F54F3.1b 4584   V: 12910118-12910222

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

31 Motifs

WormBase ID
SCANPROSITE:PS01186
SUPERFAMILY:SSF57196
PFSCAN:PS50026
SMART:SM00135
SCANPROSITE:PS01187
SMART:SM00539
SMART:SM00179
PFAM:PF00058
PFAM:PF06119
PFAM:PF07645
PFSCAN:PS51120
SMART:SM00181
PFSCAN:PS50993
PFSCAN:PS51220
INTERPRO:IPR000742
SMART:SM00682
SCANPROSITE:PS00010
INTERPRO:IPR003886
INTERPRO:IPR006605
INTERPRO:IPR009017
PFAM:PF07474
INTERPRO:IPR001881
INTERPRO:IPR011042
SUPERFAMILY:SSF63825
SUPERFAMILY:SSF54511
INTERPRO:IPR000033
PFAM:PF12947
INTERPRO:IPR024731
INTERPRO:IPR049883
HMMPANTHER:PTHR46513