WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE21000 Name  MSH-2
Molecular Weight (kDa)  95.8 Length  849
Organism  Caenorhabditis elegans MD5 Checksum  405a0148fc1e863034b700d829a48451
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
849
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H26D21.2 H26D21.2 2550   I: 3694371-3694487

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

21 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
HMMPANTHER:PTHR11361
PFAM:PF00488
PFAM:PF05192
SCANPROSITE:PS00486
PIRSF:PIRSF005813
SMART:SM00534
SMART:SM00533
INTERPRO:IPR011184
INTERPRO:IPR036187
INTERPRO:IPR036678
SUPERFAMILY:SSF48334
INTERPRO:IPR000432
INTERPRO:IPR007696
INTERPRO:IPR045076
PFAM:PF05190
INTERPRO:IPR007861
PFAM:PF01624
INTERPRO:IPR007695
INTERPRO:IPR016151