WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE25049 Name  EPI-1, isoform a
Molecular Weight (kDa)  407.8 Length  3704
Organism  Caenorhabditis elegans MD5 Checksum  846e7474efdb98c546e8aa60e1da6ba9
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
3704
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3a K08C7.3a 11115   IV: 10666833-10667028

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

31 Motifs

WormBase ID
SUPERFAMILY:SSF57196
SMART:SM00181
INTERPRO:IPR000742
INTERPRO:IPR013320
SUPERFAMILY:SSF49899
SMART:SM00282
PFSCAN:PS50025
PFAM:PF02210
INTERPRO:IPR001791
SUPERFAMILY:SSF49785
INTERPRO:IPR008979
SCANPROSITE:PS00022
HMMPANTHER:PTHR10574
PFSCAN:PS50027
SCANPROSITE:PS01248
SMART:SM00180
PFSCAN:PS51117
PRINTS:PR00011
SMART:SM00136
PFAM:PF00053
PFAM:PF00055
INTERPRO:IPR002049
INTERPRO:IPR008211
SMART:SM00281
PFSCAN:PS51115
PFAM:PF00052
INTERPRO:IPR000034
INTERPRO:IPR050440
PFAM:PF06009
INTERPRO:IPR010307