WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE46456 Name  SPC-1, isoform b
Molecular Weight (kDa)  282.3 Length  2432
Organism  Caenorhabditis elegans MD5 Checksum  23a94dc89479a5ae162d58db11283d7a
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
2432
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K10B3.10b K10B3.10b 7299   X: 3117944-3118072

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

24 Motifs

WormBase ID
SMART:SM00054
PFAM:PF13499
SUPERFAMILY:SSF47473
PFSCAN:PS50222
SCANPROSITE:PS00018
INTERPRO:IPR002048
INTERPRO:IPR011992
PFSCAN:PS50002
INTERPRO:IPR036028
SMART:SM00326
SUPERFAMILY:SSF50044
INTERPRO:IPR001452
PFAM:PF00018
HMMPANTHER:PTHR11915
PRINTS:PR00452
SMART:SM00150
PFAM:PF00435
INTERPRO:IPR002017
INTERPRO:IPR018159
SUPERFAMILY:SSF46966
PRINTS:PR01887
INTERPRO:IPR014837
SMART:SM01184
PFAM:PF08726