WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE01609 Name  METR-1
Molecular Weight (kDa)  138.9 Length  1249
Organism  Caenorhabditis elegans MD5 Checksum  92ee2b13e04adbaf33ae45e66c9bb04d
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1249
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R03D7.1 R03D7.1 3750   II: 10926564-10926689

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

32 Motifs

WormBase ID
PFSCAN:PS51332
PFAM:PF02310
SUPERFAMILY:SSF52242
INTERPRO:IPR036724
INTERPRO:IPR006158
INTERPRO:IPR004223
NCBIFAM:TIGR02082
PFSCAN:PS50970
INTERPRO:IPR036589
PFAM:PF02574
SUPERFAMILY:SSF82282
INTERPRO:IPR003726
PFSCAN:PS50974
PIRSF:PIRSF000381
SMART:SM01018
PFSCAN:PS51337
PFSCAN:PS50972
SUPERFAMILY:SSF56507
SUPERFAMILY:SSF51717
INTERPRO:IPR000489
INTERPRO:IPR003759
PFAM:PF02965
PFAM:PF00809
PFAM:PF02607
SUPERFAMILY:SSF47644
INTERPRO:IPR037010
INTERPRO:IPR011005
INTERPRO:IPR011822
INTERPRO:IPR036594
HMMPANTHER:PTHR45833