WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE44315 Name  SET-16
Molecular Weight (kDa)  276.1 Length  2475
Organism  Caenorhabditis elegans MD5 Checksum  fa92d188ed387393aa2154a4d1960890
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
2475
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T12D8.1 T12D8.1 7428   III: 13643981-13643986

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

31 Motifs

WormBase ID
INTERPRO:IPR013083
INTERPRO:IPR036910
PFSCAN:PS50016
PFAM:PF00628
INTERPRO:IPR019787
SUPERFAMILY:SSF57903
INTERPRO:IPR001965
INTERPRO:IPR011011
SMART:SM00249
INTERPRO:IPR046341
PFSCAN:PS50280
INTERPRO:IPR001214
SMART:SM00317
PFAM:PF00856
SUPERFAMILY:SSF82199
PFSCAN:PS51805
PFSCAN:PS50868
SMART:SM00508
INTERPRO:IPR003616
PFSCAN:PS51542
SMART:SM00542
SMART:SM00541
HMMPANTHER:PTHR45888
PFSCAN:PS51543
INTERPRO:IPR003889
PFAM:PF05965
PFAM:PF05964
INTERPRO:IPR003888
PFAM:PF13771
PhosphoPep:T12D8.1