WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE01414 Name  HMG-4
Molecular Weight (kDa)  78.6 Length  697
Organism  Caenorhabditis elegans MD5 Checksum  4a6c63443aa557a0e8cbf2ffb24f0ced
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
697
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T20B12.8 T20B12.8 2094   III: 7379281-7379571

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

24 Motifs

WormBase ID
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFAM:PF00505
SUPERFAMILY:SSF47095
INTERPRO:IPR009071
INTERPRO:IPR036910
PFSCAN:PS50118
SMART:SM00398
SMART:SM01287
PFAM:PF17292
PFAM:PF08512
PFAM:PF03531
PRINTS:PR00887
INTERPRO:IPR038167
INTERPRO:IPR000969
INTERPRO:IPR013719
INTERPRO:IPR024954
INTERPRO:IPR035417
HMMPANTHER:PTHR45849
INTERPRO:IPR050454
PhosphoPep:T20B12.8
ProteomeXchange_PXD032260:T20B12.8
PFAM:PF21103
INTERPRO:IPR048993