WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE54350 Name  USP-5, isoform b
Molecular Weight (kDa)  89.0 Length  791
Organism  Caenorhabditis elegans MD5 Checksum  496a8eb379b024661a1a8985ecdbb210
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
791
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T27A3.2b T27A3.2b 2376   I: 6110139-6110259

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

26 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF57850
INTERPRO:IPR013083
PFSCAN:PS50235
SCANPROSITE:PS00973
SUPERFAMILY:SSF54001
PFAM:PF00443
INTERPRO:IPR001394
INTERPRO:IPR038765
INTERPRO:IPR009060
SUPERFAMILY:SSF46934
INTERPRO:IPR015940
SMART:SM00165
PFSCAN:PS50030
INTERPRO:IPR050164
HMMPANTHER:PTHR24006
SCANPROSITE:PS00972
PFSCAN:PS50271
PFAM:PF02148
INTERPRO:IPR001607
SMART:SM00290
PFAM:PF17807
INTERPRO:IPR016652
INTERPRO:IPR041432
PIRSF:PIRSF016308
PFAM:PF22562