WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE21997 Name  SPDS-1, isoform b
Molecular Weight (kDa)  40.7 Length  366
Organism  Caenorhabditis elegans MD5 Checksum  c2fb7b7c0f4873d61a046987bbddedf4
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
366
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y46G5A.19b Y46G5A.19b 1101   II: 12806907-12807118

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

15 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF53335
INTERPRO:IPR029063
PFAM:PF01564
PFSCAN:PS51006
PIRSF:PIRSF000502
SCANPROSITE:PS01330
HMMPANTHER:PTHR11558
INTERPRO:IPR035246
INTERPRO:IPR037163
PFAM:PF17284
INTERPRO:IPR001045
INTERPRO:IPR030668
NCBIFAM:TIGR00417
NCBIFAM:NF037959