WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE34400 Name  SPG-7
Molecular Weight (kDa)  87.5 Length  782
Organism  Caenorhabditis elegans MD5 Checksum  f3f1a178cd643faa247bab6cc3679eb5
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
782
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.10 Y47G6A.10 2349   I: 3467134-3467253

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

20 Motifs

WormBase ID
Active_site
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
INTERPRO:IPR003593
SMART:SM00382
INTERPRO:IPR041569
PFAM:PF00004
INTERPRO:IPR003959
SCANPROSITE:PS00674
PFAM:PF17862
PFAM:PF01434
SUPERFAMILY:SSF140990
INTERPRO:IPR000642
HMMPANTHER:PTHR43655
INTERPRO:IPR005936
INTERPRO:IPR037219
PFAM:PF06480
INTERPRO:IPR011546
INTERPRO:IPR050928
NCBIFAM:TIGR01241