WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE28985 Name  MSH-6
Molecular Weight (kDa)  133.6 Length  1186
Organism  Caenorhabditis elegans MD5 Checksum  6a549ff19a9427414db5f9effeed6761
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1186
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y47G6A.11 Y47G6A.11 3561   I: 3449327-3449462

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

24 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
HMMPANTHER:PTHR11361
PFAM:PF00488
PFAM:PF05188
PFAM:PF05192
SCANPROSITE:PS00486
SMART:SM00534
SMART:SM00533
INTERPRO:IPR036187
INTERPRO:IPR036678
SUPERFAMILY:SSF48334
INTERPRO:IPR000432
INTERPRO:IPR007696
INTERPRO:IPR007860
PIRSF:PIRSF037677
INTERPRO:IPR017261
INTERPRO:IPR045076
PFAM:PF05190
INTERPRO:IPR007861
PFAM:PF01624
SUPERFAMILY:SSF55271
INTERPRO:IPR007695
INTERPRO:IPR016151