WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE48805 Name  PLX-1, isoform f
Molecular Weight (kDa)  132.3 Length  1185
Organism  Caenorhabditis elegans MD5 Checksum  a27a13c65cfb5db5e5c82801f7b15f7f
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1185
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y55F3AL.1f Y55F3AL.1f 3558   IV: 972383-972922

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

19 Motifs

WormBase ID
INTERPRO:IPR013783
SUPERFAMILY:SSF81296
INTERPRO:IPR014756
SUPERFAMILY:SSF48350
INTERPRO:IPR008936
HMMPANTHER:PTHR22625
PFAM:PF20170
PFAM:PF08337
INTERPRO:IPR046800
SMART:SM00429
SMART:SM00423
PFAM:PF01833
INTERPRO:IPR002165
INTERPRO:IPR002909
INTERPRO:IPR013548
INTERPRO:IPR016201
PFAM:PF01437
SUPERFAMILY:SSF103575
INTERPRO:IPR031148