WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE51855 Name  VAB-10, isoform j
Molecular Weight (kDa)  560.4 Length  4932
Organism  Caenorhabditis elegans MD5 Checksum  cd96ad8dab151cdb85dbd12f798c42a0
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
4932
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1j ZK1151.1j 14799   I: 11747762-11747801

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

28 Motifs

WormBase ID
SUPERFAMILY:SSF47473
INTERPRO:IPR011992
PFSCAN:PS50002
PFSCAN:PS50021
INTERPRO:IPR036872
SCANPROSITE:PS00019
SMART:SM00033
SCANPROSITE:PS00020
PFAM:PF00307
INTERPRO:IPR001715
SUPERFAMILY:SSF47576
PFAM:PF02187
SUPERFAMILY:SSF143575
INTERPRO:IPR003108
INTERPRO:IPR036534
PFSCAN:PS51460
SMART:SM00243
SMART:SM00150
PFAM:PF00435
INTERPRO:IPR002017
INTERPRO:IPR018159
SUPERFAMILY:SSF46966
HMMPANTHER:PTHR23169
INTERPRO:IPR043197
PFAM:PF17902
INTERPRO:IPR041615
INTERPRO:IPR049538
PFAM:PF21020