WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE40298 Name  PXN-1
Molecular Weight (kDa)  146.3 Length  1285
Organism  Caenorhabditis elegans MD5 Checksum  5c0a3d8564fd42ed41245432a40a73f6
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1285
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK994.3 ZK994.3 3858   V: 8494895-8495018

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

30 Motifs

WormBase ID
Active_site
INTERPRO:IPR036179
INTERPRO:IPR013783
SUPERFAMILY:SSF48726
PFSCAN:PS50835
SUPERFAMILY:SSF52058
SMART:SM00409
INTERPRO:IPR003599
SMART:SM00408
INTERPRO:IPR003598
INTERPRO:IPR013098
PFAM:PF07679
INTERPRO:IPR037120
HMMPANTHER:PTHR11475
PRINTS:PR00457
PFSCAN:PS50292
SUPERFAMILY:SSF48113
PFAM:PF03098
INTERPRO:IPR019791
INTERPRO:IPR010255
INTERPRO:IPR032675
SMART:SM00369
PFAM:PF13855
INTERPRO:IPR003591
INTERPRO:IPR001611
INTERPRO:IPR000483
SMART:SM00082
PFAM:PF01462
SMART:SM00013
INTERPRO:IPR000372