WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE50648 Name  EGL-8, isoform e
Molecular Weight (kDa)  168.2 Length  1500
Organism  Caenorhabditis elegans MD5 Checksum  f983af3a1fbc393d9104cef22d7cf9ad
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1500
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0348.4e B0348.4e 4503   V: 21007-21090

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

35 Motifs

WormBase ID
Active_site
PFAM:PF00168
SUPERFAMILY:SSF49562
INTERPRO:IPR000008
INTERPRO:IPR035892
PFSCAN:PS50004
SMART:SM00239
INTERPRO:IPR011992
SUPERFAMILY:SSF47473
SUPERFAMILY:SSF50729
SUPERFAMILY:SSF51695
INTERPRO:IPR017946
INTERPRO:IPR001711
INTERPRO:IPR001192
SMART:SM00148
PFAM:PF00387
PFAM:PF00388
INTERPRO:IPR000909
PFSCAN:PS50008
HMMPANTHER:PTHR10336
PFSCAN:PS50007
SMART:SM00149
PRINTS:PR00390
INTERPRO:IPR015359
INTERPRO:IPR037862
INTERPRO:IPR016280
PFAM:PF17787
PFAM:PF09279
SUPERFAMILY:SSF69989
PIRSF:PIRSF000956