WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE06730 Name  RPM-1
Molecular Weight (kDa)  418.0 Length  3766
Organism  Caenorhabditis elegans MD5 Checksum  1345f83f3ad8f62af3b4d205ea25f6ab
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
3766
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01B7.6 C01B7.6 11301   V: 8805672-8805879

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

27 Motifs

WormBase ID
Active_site
INTERPRO:IPR013083
SUPERFAMILY:SSF57850
PFSCAN:PS50119
PFSCAN:PS50089
SMART:SM00336
INTERPRO:IPR000315
SMART:SM00184
INTERPRO:IPR001841
SUPERFAMILY:SSF49785
INTERPRO:IPR008979
INTERPRO:IPR012983
INTERPRO:IPR038648
PFAM:PF08005
SUPERFAMILY:SSF50985
INTERPRO:IPR009091
INTERPRO:IPR000408
PFSCAN:PS50012
SCANPROSITE:PS00626
PFAM:PF13540
PFAM:PF00415
SMART:SM01337
PFSCAN:PS51284
INTERPRO:IPR004939
PFAM:PF03256
HMMPANTHER:PTHR45943
ProteomeXchange_PXD032260:C01B7.6