WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE07806 Name  ERM-1, isoform b
Molecular Weight (kDa)  66.0 Length  564
Organism  Caenorhabditis elegans MD5 Checksum  9f78737f4671670092fcdef1ff4d50bb
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
564
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G8.5b C01G8.5b 1695   I: 5284598-5284690

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

32 Motifs

WormBase ID
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
SMART:SM01196
PFSCAN:PS50057
PFAM:PF09380
SMART:SM00295
INTERPRO:IPR018980
SUPERFAMILY:SSF47031
SUPERFAMILY:SSF54236
INTERPRO:IPR019748
INTERPRO:IPR018979
PRINTS:PR00935
INTERPRO:IPR035963
INTERPRO:IPR019749
SCANPROSITE:PS00661
PFAM:PF00373
SCANPROSITE:PS00660
PFAM:PF09379
INTERPRO:IPR014352
INTERPRO:IPR029071
INTERPRO:IPR000798
PRINTS:PR00661
HMMPANTHER:PTHR23281
SUPERFAMILY:SSF48678
INTERPRO:IPR011174
INTERPRO:IPR008954
PIRSF:PIRSF002305
PFAM:PF00769
INTERPRO:IPR011259
PFAM:PF20492