WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE53342 Name  VAV-1, isoform c
Molecular Weight (kDa)  113.4 Length  1003
Organism  Caenorhabditis elegans MD5 Checksum  e480a7ede7e27b2a077443ccef66a4d9
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1003
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C35B8.2c C35B8.2c 3012   X: 9217459-9217551

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

42 Motifs

WormBase ID
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
SCANPROSITE:PS00479
SMART:SM00325
SMART:SM00109
SUPERFAMILY:SSF57889
PFSCAN:PS50010
PFSCAN:PS50081
INTERPRO:IPR002219
INTERPRO:IPR035899
PFAM:PF00130
PFAM:PF00621
INTERPRO:IPR046349
SUPERFAMILY:SSF48065
INTERPRO:IPR000219
SMART:SM00326
PFSCAN:PS50002
INTERPRO:IPR001452
INTERPRO:IPR036028
SUPERFAMILY:SSF50044
PFAM:PF07653
SMART:SM00033
INTERPRO:IPR036872
PFSCAN:PS50021
INTERPRO:IPR001715
PFAM:PF00307
SUPERFAMILY:SSF47576