WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE35836 Name  IRE-1, isoform a
Molecular Weight (kDa)  109.8 Length  967
Organism  Caenorhabditis elegans MD5 Checksum  e2e993a8fbad430f6db22c929c07c68e
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
967
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C41C4.4a C41C4.4a 2904   II: 8112670-8112843

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

23 Motifs

WormBase ID
Active_site
INTERPRO:IPR015943
SUPERFAMILY:SSF56112
INTERPRO:IPR011009
PFSCAN:PS50011
PFAM:PF00069
INTERPRO:IPR000719
SMART:SM00220
SUPERFAMILY:SSF50998
INTERPRO:IPR011047
SCANPROSITE:PS00108
SMART:SM00580
INTERPRO:IPR002372
INTERPRO:IPR018391
SMART:SM00564
HMMPANTHER:PTHR13954
PFSCAN:PS51392
PFAM:PF06479
INTERPRO:IPR010513
INTERPRO:IPR038357
INTERPRO:IPR045133
PFAM:PF01011
PhosphoPep:C41C4.4a