WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE51760 Name  CDH-4
Molecular Weight (kDa)  481.2 Length  4328
Organism  Caenorhabditis elegans MD5 Checksum  16ba79116520bb185d713fb6ccd43862
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
4328
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25F2.2 F25F2.2 12987   III: 4520459-4520695

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

27 Motifs

WormBase ID
PFSCAN:PS50026
SMART:SM00181
SUPERFAMILY:SSF57196
SCANPROSITE:PS01186
INTERPRO:IPR000742
SMART:SM00179
INTERPRO:IPR001881
SMART:SM00282
SUPERFAMILY:SSF49899
INTERPRO:IPR013320
PFSCAN:PS50025
INTERPRO:IPR001791
INTERPRO:IPR038765
SUPERFAMILY:SSF54001
PRINTS:PR00205
PFSCAN:PS50268
SMART:SM00112
SCANPROSITE:PS00232
SUPERFAMILY:SSF49313
PFAM:PF00028
INTERPRO:IPR015919
INTERPRO:IPR002126
SCANPROSITE:PS00022
PFAM:PF00008
PFAM:PF00054
INTERPRO:IPR050971
HMMPANTHER:PTHR24025