WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE17113 Name  SPT-16
Molecular Weight (kDa)  116.8 Length  1030
Organism  Caenorhabditis elegans MD5 Checksum  233e4109c64dec70f888f846eae9754e
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1030
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A3.3 F55A3.3 3093   I: 10789137-10789208

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

20 Motifs

WormBase ID
INTERPRO:IPR011993
PFAM:PF00557
INTERPRO:IPR000994
SUPERFAMILY:SSF55920
INTERPRO:IPR036005
INTERPRO:IPR029149
SMART:SM01287
PFAM:PF08512
INTERPRO:IPR013719
INTERPRO:IPR040258
INTERPRO:IPR029148
HMMPANTHER:PTHR13980
SMART:SM01286
PFAM:PF14826
SMART:SM01285
INTERPRO:IPR013953
PFAM:PF08644
ProteomeXchange_PXD032260:F55A3.3
INTERPRO:IPR048969
PFAM:PF21091