WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE48610 Name  EGL-4, isoform h
Molecular Weight (kDa)  87.1 Length  783
Organism  Caenorhabditis elegans MD5 Checksum  df01e781a2e6a0583f288bb4accd6d34
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
783
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F55A8.2h F55A8.2h 2352   IV: 1848071-1848226

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

26 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF56112
INTERPRO:IPR011009
PFSCAN:PS50011
PFAM:PF00069
INTERPRO:IPR000719
SMART:SM00220
SCANPROSITE:PS00107
SCANPROSITE:PS00108
INTERPRO:IPR014710
PFSCAN:PS51285
INTERPRO:IPR000961
SMART:SM00133
SCANPROSITE:PS00889
SCANPROSITE:PS00888
PFAM:PF00027
SMART:SM00100
INTERPRO:IPR000595
PFSCAN:PS50042
SUPERFAMILY:SSF51206
INTERPRO:IPR018490
HMMPANTHER:PTHR24353
PRINTS:PR00104
INTERPRO:IPR002374
PIRSF:PIRSF000559
ProteomeXchange_PXD032260:F55A8.2h