WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE40655 Name  PTRG-1, isoform a
Molecular Weight (kDa)  131.4 Length  1159
Organism  Caenorhabditis elegans MD5 Checksum  82d9ed4d08abeb4567fd13acc04c1fca
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1159
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.4a K04D7.4a 3480   IV: 10183950-10184009

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

24 Motifs

WormBase ID
Active_site
PFSCAN:PS50055
PRINTS:PR00700
SMART:SM00404
SMART:SM00194
PFAM:PF00102
SUPERFAMILY:SSF52799
INTERPRO:IPR000242
INTERPRO:IPR003595
INTERPRO:IPR029021
INTERPRO:IPR013783
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
PFSCAN:PS50835
PFSCAN:PS50056
SCANPROSITE:PS00383
PFSCAN:PS50853
SMART:SM00060
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
INTERPRO:IPR036116
PFAM:PF00041
HMMPANTHER:PTHR46957
INTERPRO:IPR050713