WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE44709 Name  PTRG-1, isoform b
Molecular Weight (kDa)  126.0 Length  1113
Organism  Caenorhabditis elegans MD5 Checksum  2d20703788ffbb2999b43d97950f0b60
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1113
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K04D7.4b K04D7.4b 3342   IV: 10183950-10184009

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

23 Motifs

WormBase ID
PFSCAN:PS50055
PRINTS:PR00700
SMART:SM00404
SMART:SM00194
PFAM:PF00102
SUPERFAMILY:SSF52799
INTERPRO:IPR000242
INTERPRO:IPR003595
INTERPRO:IPR029021
INTERPRO:IPR013783
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
PFSCAN:PS50835
PFSCAN:PS50056
SCANPROSITE:PS00383
PFSCAN:PS50853
SMART:SM00060
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
INTERPRO:IPR036116
PFAM:PF00041
HMMPANTHER:PTHR46957
INTERPRO:IPR050713