WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE43544 Name  EPI-1, isoform c
Molecular Weight (kDa)  405.6 Length  3683
Organism  Caenorhabditis elegans MD5 Checksum  61b768362cf1e1f11bea9092b193eb9b
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
3683
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K08C7.3c K08C7.3c 11052   IV: 10666833-10667028

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

30 Motifs

WormBase ID
SMART:SM00181
SUPERFAMILY:SSF57196
INTERPRO:IPR000742
SMART:SM00282
SUPERFAMILY:SSF49899
INTERPRO:IPR013320
PFSCAN:PS50025
PFAM:PF02210
INTERPRO:IPR001791
SUPERFAMILY:SSF49785
INTERPRO:IPR008979
SCANPROSITE:PS00022
HMMPANTHER:PTHR10574
PRINTS:PR00011
SCANPROSITE:PS01248
SMART:SM00180
PFAM:PF00055
PFAM:PF00053
SMART:SM00136
PFSCAN:PS50027
PFSCAN:PS51117
INTERPRO:IPR002049
INTERPRO:IPR008211
PFSCAN:PS51115
SMART:SM00281
PFAM:PF00052
INTERPRO:IPR000034
INTERPRO:IPR050440
PFAM:PF06009
INTERPRO:IPR010307