WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE00274 Name  LIN-12
Molecular Weight (kDa)  157.1 Length  1429
Organism  Caenorhabditis elegans MD5 Checksum  c3619c3684618b863fa3d52a7a7b67b6
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1429
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R107.8 R107.8 4290   III: 9060402-9060524

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

42 Motifs

WormBase ID
PFSCAN:PS50026
SMART:SM00181
SUPERFAMILY:SSF57196
SCANPROSITE:PS01186
SCANPROSITE:PS00010
INTERPRO:IPR000742
SMART:SM00179
SCANPROSITE:PS01187
PFAM:PF07645
INTERPRO:IPR001881
PFSCAN:PS50297
PFSCAN:PS50088
SMART:SM00248
PFAM:PF12796
SUPERFAMILY:SSF48403
INTERPRO:IPR002110
INTERPRO:IPR036770
SCANPROSITE:PS00022
PFAM:PF12661
PFAM:PF00008
INTERPRO:IPR013032
SUPERFAMILY:SSF57184
INTERPRO:IPR009030
INTERPRO:IPR049883
HMMPANTHER:PTHR24033
PFAM:PF07974
INTERPRO:IPR013111
SMART:SM00004
PRINTS:PR01452
PFAM:PF00066