WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE53014 Name  SOS-1, isoform b
Molecular Weight (kDa)  170.2 Length  1493
Organism  Caenorhabditis elegans MD5 Checksum  bf1439fa30f1afda38b9182d43e0be7a
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
1493
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T28F12.3b T28F12.3b 4482   V: 4517689-4517811

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

26 Motifs

WormBase ID
INTERPRO:IPR008937
INTERPRO:IPR001895
INTERPRO:IPR036964
PFAM:PF00618
INTERPRO:IPR023578
SMART:SM00229
PFAM:PF00617
SMART:SM00147
SUPERFAMILY:SSF48366
INTERPRO:IPR000651
HMMPANTHER:PTHR23113
PFSCAN:PS50212
PFSCAN:PS50009
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
SMART:SM00325
PFSCAN:PS50010
INTERPRO:IPR035899
SUPERFAMILY:SSF48065
INTERPRO:IPR000219
INTERPRO:IPR009072
SUPERFAMILY:SSF47113
PFAM:PF22697