WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE33259 Name  TANK-1, isoform b
Molecular Weight (kDa)  250.3 Length  2238
Organism  Caenorhabditis elegans MD5 Checksum  b9c04b0aebe0c80d3c8c5f096c3a8175
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
2238
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1005.1b ZK1005.1b 6717   V: 1276531-1276734

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

25 Motifs

WormBase ID
PFSCAN:PS50297
PFSCAN:PS50088
SMART:SM00248
PFAM:PF12796
SUPERFAMILY:SSF48403
INTERPRO:IPR002110
INTERPRO:IPR036770
SUPERFAMILY:SSF142921
SUPERFAMILY:SSF56399
INTERPRO:IPR004102
INTERPRO:IPR012317
INTERPRO:IPR008893
INTERPRO:IPR036930
INTERPRO:IPR036616
SMART:SM00773
PFSCAN:PS51059
PFAM:PF05406
PhosphoPep:ZK1005.1b
PFAM:PF02877
PFAM:PF00644
SUPERFAMILY:SSF47587
HMMPANTHER:PTHR10459
PFSCAN:PS51060
PFSCAN:PS51977
INTERPRO:IPR050800