WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CE51845 Name  VAB-10, isoform m
Molecular Weight (kDa)  557.9 Length  4946
Organism  Caenorhabditis elegans MD5 Checksum  ddf0c271d3e1af2b73526c3c45c3f16d
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

Proteins

1 Sequence

Length
4946
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1m ZK1151.1m 14841   I: 11747762-11747801

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. elegans protein sequence (Fasta)  

26 Motifs

WormBase ID
INTERPRO:IPR011992
SUPERFAMILY:SSF47473
PFSCAN:PS50002
SMART:SM00033
INTERPRO:IPR036872
PFSCAN:PS50021
INTERPRO:IPR001715
PFAM:PF00307
SUPERFAMILY:SSF47576
INTERPRO:IPR043197
SMART:SM00243
PFSCAN:PS51460
SUPERFAMILY:SSF143575
PFAM:PF02187
INTERPRO:IPR036534
INTERPRO:IPR003108
HMMPANTHER:PTHR23169
PFAM:PF00435
SMART:SM00150
INTERPRO:IPR018159
INTERPRO:IPR002017
SUPERFAMILY:SSF46966
INTERPRO:IPR041615
PFAM:PF17902
PFAM:PF21020
INTERPRO:IPR049538