WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CN05654 Name  Cbn-TOP-2
Molecular Weight (kDa)  175.5 Length  1547
Organism  Caenorhabditis brenneri MD5 Checksum  90819bbd15b5a8c2cdbaf7b17f1151a6
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1 Organism

Name Taxon Id
Caenorhabditis brenneri 135651

Proteins

1 Sequence

Length
1547
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBN03194 CBN03194   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. brenneri protein sequence (Fasta)  

31 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF54211
INTERPRO:IPR014721
INTERPRO:IPR020568
INTERPRO:IPR036890
SUPERFAMILY:SSF55874
INTERPRO:IPR003594
PFAM:PF02518
PFSCAN:PS50880
INTERPRO:IPR006171
HMMPANTHER:PTHR10169:SF46
PFAM:PF01751
PRINTS:PR00418
PRINTS:PR01158
SCANPROSITE:PS00177
SMART:SM00433
HMMPANTHER:PTHR10169
SUPERFAMILY:SSF56719
INTERPRO:IPR001154
INTERPRO:IPR001241
INTERPRO:IPR002205
SMART:SM00434
PFAM:PF00204
PFAM:PF16898
PFAM:PF00521
INTERPRO:IPR013760
INTERPRO:IPR031660
INTERPRO:IPR013506
INTERPRO:IPR013757
INTERPRO:IPR013758