WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CBP03559 Name  Cbr-MSH-6
Molecular Weight (kDa)  134.0 Length  1185
Organism  Caenorhabditis briggsae MD5 Checksum  1ebbc194e1f05195b00395da3c1e8f4e
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

Proteins

1 Sequence

Length
1185
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG14959 CBG14959   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. briggsae protein sequence (Fasta)  

22 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
HMMPANTHER:PTHR11361
PFAM:PF00488
PFAM:PF05192
SCANPROSITE:PS00486
SMART:SM00534
SMART:SM00533
INTERPRO:IPR036187
INTERPRO:IPR036678
SUPERFAMILY:SSF48334
INTERPRO:IPR000432
INTERPRO:IPR007696
PIRSF:PIRSF037677
INTERPRO:IPR017261
PFAM:PF05190
INTERPRO:IPR007861
PFAM:PF01624
SUPERFAMILY:SSF55271
INTERPRO:IPR007695
INTERPRO:IPR016151
HMMPANTHER:PTHR11361:SF34