WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CN38547 Name  Cbn-TTN-1, isoform a
Molecular Weight (kDa)  2310.3 Length  21104
Organism  Caenorhabditis brenneri MD5 Checksum  94ae5c07183ba959aac58873164ea601
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1 Organism

Name Taxon Id
Caenorhabditis brenneri 135651

Proteins

1 Sequence

Length
21104
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBN15845a CBN15845a   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. brenneri protein sequence (Fasta)  

30 Motifs

WormBase ID
SUPERFAMILY:SSF56112
INTERPRO:IPR011009
PFSCAN:PS50011
INTERPRO:IPR013783
SUPERFAMILY:SSF48726
INTERPRO:IPR036179
PFAM:PF00069
INTERPRO:IPR000719
SMART:SM00220
PFSCAN:PS50835
SCANPROSITE:PS00107
SCANPROSITE:PS00108
PFSCAN:PS50853
SMART:SM00060
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
INTERPRO:IPR036116
SMART:SM00409
INTERPRO:IPR003599
SMART:SM00408
INTERPRO:IPR003598
PFAM:PF00041
PFAM:PF07679
INTERPRO:IPR013098
PFSCAN:PS50975
PFAM:PF13927
HMMPANTHER:PTHR13817
INTERPRO:IPR012969
PFAM:PF08017
HMMPANTHER:PTHR13817:SF28