WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? CBP05248 Name  Cbr-VPS-34
Molecular Weight (kDa)  102.6 Length  895
Organism  Caenorhabditis briggsae MD5 Checksum  c28a02ded26db8c0b7af28ec79d37e01
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1 Organism

Name Taxon Id
Caenorhabditis briggsae 6238

Proteins

1 Sequence

Length
895
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CBG22101 CBG22101   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. briggsae protein sequence (Fasta)  

27 Motifs

WormBase ID
INTERPRO:IPR035892
SUPERFAMILY:SSF49562
INTERPRO:IPR011009
SUPERFAMILY:SSF56112
INTERPRO:IPR016024
SUPERFAMILY:SSF48371
INTERPRO:IPR036940
INTERPRO:IPR042236
INTERPRO:IPR001263
INTERPRO:IPR002420
INTERPRO:IPR015433
PFSCAN:PS51547
PFSCAN:PS50290
SCANPROSITE:PS00916
HMMPANTHER:PTHR10048
PFSCAN:PS51545
PFAM:PF00613
PFAM:PF00792
PFAM:PF00454
INTERPRO:IPR000403
SMART:SM00145
SMART:SM00146
SMART:SM00142
SCANPROSITE:PS00915
INTERPRO:IPR008290
PIRSF:PIRSF000587
HMMPANTHER:PTHR10048:SF7