WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA68515 Name  Cjp-IRE-1
Molecular Weight (kDa)  109.5 Length  968
Organism  Caenorhabditis japonica MD5 Checksum  70d361279067196b0f3372ec452ca1e1
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
968
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA07340 CJA07340   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

24 Motifs

WormBase ID
Active_site
INTERPRO:IPR015943
INTERPRO:IPR011009
PFSCAN:PS50011
SUPERFAMILY:SSF56112
INTERPRO:IPR000719
SMART:SM00220
PFAM:PF00069
SUPERFAMILY:SSF50998
INTERPRO:IPR011047
SCANPROSITE:PS00108
SMART:SM00580
INTERPRO:IPR018997
INTERPRO:IPR002372
SMART:SM00564
INTERPRO:IPR018391
PFSCAN:PS51392
PFAM:PF06479
HMMPANTHER:PTHR13954
INTERPRO:IPR010513
INTERPRO:IPR038357
HMMPANTHER:PTHR13954:SF15
INTERPRO:IPR033523
PFAM:PF01011