WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA41945 Name  Cjp-MSH-2
Molecular Weight (kDa)  95.7 Length  849
Organism  Caenorhabditis japonica MD5 Checksum  9c5a0721587ec4a2770c65249900f48b
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
849
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA11360 CJA11360   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

22 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
HMMPANTHER:PTHR11361
PFAM:PF00488
PFAM:PF05192
SCANPROSITE:PS00486
PIRSF:PIRSF005813
SMART:SM00534
SMART:SM00533
INTERPRO:IPR011184
INTERPRO:IPR036187
INTERPRO:IPR036678
SUPERFAMILY:SSF48334
INTERPRO:IPR000432
INTERPRO:IPR007696
PFAM:PF05190
INTERPRO:IPR007861
PFAM:PF01624
INTERPRO:IPR007695
INTERPRO:IPR016151
INTERPRO:IPR032642
HMMPANTHER:PTHR11361:SF35