WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA59142 Name  Cjp-XDH-1, isoform b
Molecular Weight (kDa)  136.7 Length  1229
Organism  Caenorhabditis japonica MD5 Checksum  e760ff3b1cf3f91c065e8b82448c849f
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
1229
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA13453b CJA13453b   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

27 Motifs

WormBase ID
Active_site
PFAM:PF03006
INTERPRO:IPR004254
PFSCAN:PS51387
SUPERFAMILY:SSF56176
INTERPRO:IPR016169
INTERPRO:IPR036318
INTERPRO:IPR005107
SUPERFAMILY:SSF56003
INTERPRO:IPR037165
HMMPANTHER:PTHR11908:SF100
PFAM:PF02738
INTERPRO:IPR008274
HMMPANTHER:PTHR11908
SUPERFAMILY:SSF54665
PFAM:PF01315
INTERPRO:IPR016208
INTERPRO:IPR000674
INTERPRO:IPR002346
INTERPRO:IPR036856
SMART:SM01008
PFAM:PF00941
PIRSF:PIRSF000127
SUPERFAMILY:SSF55447
PFAM:PF03450
INTERPRO:IPR036683
SMART:SM01092