WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA52752 Name  CJA16232
Molecular Weight (kDa)  102.1 Length  915
Organism  Caenorhabditis japonica MD5 Checksum  f302762a072d9857f07b9ff4d8cd8ce0
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
915
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA16232 CJA16232   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

30 Motifs

WormBase ID
SCANPROSITE:PS01186
SUPERFAMILY:SSF57196
PFSCAN:PS50026
SCANPROSITE:PS01187
SMART:SM00179
SMART:SM00181
INTERPRO:IPR000742
SCANPROSITE:PS00010
INTERPRO:IPR001881
SCANPROSITE:PS00022
INTERPRO:IPR036084
PFAM:PF01826
SUPERFAMILY:SSF57567
INTERPRO:IPR002919
PFSCAN:PS51233
PFAM:PF00094
SMART:SM00216
INTERPRO:IPR001846
SMART:SM00186
PFAM:PF00147
INTERPRO:IPR002181
SUPERFAMILY:SSF56496
INTERPRO:IPR036056
PFSCAN:PS51406
INTERPRO:IPR014716
HMMPANTHER:PTHR11339
INTERPRO:IPR014715
INTERPRO:IPR014853
PFAM:PF08742
HMMPANTHER:PTHR11339:SF380