WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA51435 Name  Cjp-VAB-1
Molecular Weight (kDa)  122.1 Length  1098
Organism  Caenorhabditis japonica MD5 Checksum  424afa35baf81cb923f79c77153042e3
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
1098
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA06042 CJA06042   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

34 Motifs

WormBase ID
Active_site
SUPERFAMILY:SSF56112
INTERPRO:IPR001245
INTERPRO:IPR011009
PFAM:PF07714
PFSCAN:PS50011
INTERPRO:IPR013783
SCANPROSITE:PS00107
PFSCAN:PS50853
SMART:SM00060
SUPERFAMILY:SSF49265
INTERPRO:IPR003961
INTERPRO:IPR036116
PFAM:PF00041
PRINTS:PR00109
INTERPRO:IPR020635
SMART:SM00219
SCANPROSITE:PS00109
SUPERFAMILY:SSF49785
INTERPRO:IPR008979
HMMPANTHER:PTHR24416
SUPERFAMILY:SSF57184
INTERPRO:IPR009030
HMMPANTHER:PTHR24416:SF539
INTERPRO:IPR011641
SMART:SM01411
INTERPRO:IPR016257
PIRSF:PIRSF000666
INTERPRO:IPR001090
INTERPRO:IPR027936