WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA57011 Name  Cjp-ATRN-1
Molecular Weight (kDa)  139.3 Length  1256
Organism  Caenorhabditis japonica MD5 Checksum  7c82b1d47719e71ceb4d6918c1a41934
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
1256
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA06690 CJA06690   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

32 Motifs

WormBase ID
PFSCAN:PS50026
SMART:SM00181
SUPERFAMILY:SSF57196
SCANPROSITE:PS01186
INTERPRO:IPR000742
INTERPRO:IPR008979
SCANPROSITE:PS00022
PFAM:PF00431
SUPERFAMILY:SSF49854
INTERPRO:IPR000859
SMART:SM00042
PFSCAN:PS01180
INTERPRO:IPR035914
HMMPANTHER:PTHR10574
SMART:SM00612
PFAM:PF01344
INTERPRO:IPR006652
SUPERFAMILY:SSF117281
INTERPRO:IPR015915
INTERPRO:IPR011043
SUPERFAMILY:SSF50965
SCANPROSITE:PS01248
SMART:SM00180
PFAM:PF00053
PFSCAN:PS50027
INTERPRO:IPR002049
PFAM:PF13418
INTERPRO:IPR002165
INTERPRO:IPR016201
SMART:SM00423