WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA39653 Name  Cjp-VAV-1, isoform b
Molecular Weight (kDa)  110.6 Length  976
Organism  Caenorhabditis japonica MD5 Checksum  d12d81a95ad0520c8019739fcb634634
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
976
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA08478b CJA08478b   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

41 Motifs

WormBase ID
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFAM:PF00169
SMART:SM00325
SMART:SM00109
SUPERFAMILY:SSF57889
PFSCAN:PS50010
PFSCAN:PS50081
INTERPRO:IPR002219
INTERPRO:IPR035899
PFAM:PF00130
PFAM:PF00621
SUPERFAMILY:SSF48065
INTERPRO:IPR000219
SMART:SM00326
PFSCAN:PS50002
INTERPRO:IPR001452
INTERPRO:IPR036028
SUPERFAMILY:SSF50044
PFAM:PF07653
SMART:SM00033
INTERPRO:IPR036872
PFSCAN:PS50021
INTERPRO:IPR001715
PFAM:PF00307
SUPERFAMILY:SSF47576
SMART:SM00252