WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? JA39833 Name  Cjp-PXF-1, isoform b
Molecular Weight (kDa)  173.7 Length  1554
Organism  Caenorhabditis japonica MD5 Checksum  6f828bf5bf40d94de07051e22280a3ee
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1 Organism

Name Taxon Id
Caenorhabditis japonica 281687

Proteins

1 Sequence

Length
1554
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:CJA09185b CJA09185b   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase C. japonica protein sequence (Fasta)  

40 Motifs

WormBase ID
INTERPRO:IPR008937
INTERPRO:IPR001895
PFAM:PF00618
INTERPRO:IPR023578
SMART:SM00229
PFAM:PF00617
SMART:SM00147
SUPERFAMILY:SSF48366
INTERPRO:IPR000651
HMMPANTHER:PTHR23113
PFSCAN:PS50212
PFSCAN:PS50009
SUPERFAMILY:SSF50156
INTERPRO:IPR001478
INTERPRO:IPR036034
SUPERFAMILY:SSF54236
INTERPRO:IPR029071
PFSCAN:PS50106
SMART:SM00228
SUPERFAMILY:SSF52374
INTERPRO:IPR014729
INTERPRO:IPR014710
SCANPROSITE:PS00720
PFSCAN:PS50200
SMART:SM00100
INTERPRO:IPR000595
PFSCAN:PS50042
SUPERFAMILY:SSF51206
INTERPRO:IPR018490
INTERPRO:IPR000159