WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP72676 Name  Ppa-OBR-4
Molecular Weight (kDa)  190.5 Length  1733
Organism  Pristionchus pacificus MD5 Checksum  78cb10dd44d8f95f8dc3d3cf600559c0
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1733
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA01404 PPA01404   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

25 Motifs

WormBase ID
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
PFAM:PF00169
SUPERFAMILY:SSF56112
INTERPRO:IPR001245
INTERPRO:IPR011009
PFAM:PF07714
PFSCAN:PS50011
SMART:SM00252
PFSCAN:PS50001
INTERPRO:IPR000980
INTERPRO:IPR036860
SUPERFAMILY:SSF55550
HMMPANTHER:PTHR10972
INTERPRO:IPR000648
INTERPRO:IPR037239
HMMPANTHER:PTHR10972:SF27
SCANPROSITE:PS01013
PFAM:PF01237
SUPERFAMILY:SSF144000
PFAM:PF07896
INTERPRO:IPR012875