WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP55706 Name  Ppa-TRM-2A
Molecular Weight (kDa)  115.8 Length  1044
Organism  Pristionchus pacificus MD5 Checksum  d77fee38f5bb65619174146115caef99
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1044
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA05293 PPA05293   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

23 Motifs

WormBase ID
INTERPRO:IPR036291
SUPERFAMILY:SSF51735
INTERPRO:IPR029063
SUPERFAMILY:SSF53335
SUPERFAMILY:SSF54928
INTERPRO:IPR012677
INTERPRO:IPR035979
PFAM:PF08240
INTERPRO:IPR013149
PFAM:PF00107
SUPERFAMILY:SSF50129
INTERPRO:IPR013154
INTERPRO:IPR011032
SCANPROSITE:PS00059
PFSCAN:PS51687
INTERPRO:IPR010280
PFAM:PF05958
HMMPANTHER:PTHR43880:SF21
HMMPANTHER:PTHR43880
TIGRFAM:TIGR02818
INTERPRO:IPR014183
SCANPROSITE:PS01231
SCANPROSITE:PS01230