WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP62745 Name  Ppa-RHGF-1
Molecular Weight (kDa)  153.3 Length  1354
Organism  Pristionchus pacificus MD5 Checksum  37d5c61ab5bdcc213ae4513a1a3c40b5
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1354
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA05314 PPA05314   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

32 Motifs

WormBase ID
SMART:SM00233
PFSCAN:PS50003
INTERPRO:IPR001849
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
SCANPROSITE:PS00479
SMART:SM00325
SMART:SM00109
SUPERFAMILY:SSF57889
PFSCAN:PS50010
PFSCAN:PS50081
INTERPRO:IPR002219
INTERPRO:IPR035899
PFAM:PF00130
PFAM:PF00621
SUPERFAMILY:SSF48097
SUPERFAMILY:SSF48065
INTERPRO:IPR036305
INTERPRO:IPR000219
HMMPANTHER:PTHR45872
HMMPANTHER:PTHR45872:SF2
INTERPRO:IPR015212
INTERPRO:IPR041020
PFAM:PF09128
PFAM:PF17838
SUPERFAMILY:SSF50156
INTERPRO:IPR001478
INTERPRO:IPR036034
PFSCAN:PS50106
SMART:SM00228