WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP52648 Name  Ppa-POD-2
Molecular Weight (kDa)  248.2 Length  2202
Organism  Pristionchus pacificus MD5 Checksum  bc1e93083ab96d373008df92badad9d1
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
2202
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA05673 PPA05673   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

31 Motifs

WormBase ID
SUPERFAMILY:SSF52096
INTERPRO:IPR029045
INTERPRO:IPR011053
SUPERFAMILY:SSF56059
SUPERFAMILY:SSF51230
SCANPROSITE:PS00867
SUPERFAMILY:SSF52440
SMART:SM00878
INTERPRO:IPR016185
PFAM:PF00289
PFAM:PF02786
PFSCAN:PS50975
PFSCAN:PS50979
PFAM:PF00364
INTERPRO:IPR000089
SUPERFAMILY:SSF51246
PFAM:PF02785
INTERPRO:IPR005481
INTERPRO:IPR005479
INTERPRO:IPR011054
INTERPRO:IPR005482
INTERPRO:IPR013815
PFSCAN:PS50989
PFAM:PF01039
INTERPRO:IPR034733
PFSCAN:PS50980
PFAM:PF08326
INTERPRO:IPR013537
SCANPROSITE:PS00866
HMMPANTHER:PTHR45728