WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP52519 Name  Ppa-COGC-5
Molecular Weight (kDa)  340.9 Length  3070
Organism  Pristionchus pacificus MD5 Checksum  ef7b04a2db08ff1c6cff78d0447c1ab2
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
3070
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA06518 PPA06518   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

25 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
SUPERFAMILY:SSF48371
INTERPRO:IPR016024
SUPERFAMILY:SSF51045
INTERPRO:IPR001202
INTERPRO:IPR036020
PFSCAN:PS50020
SMART:SM00456
SUPERFAMILY:SSF50465
INTERPRO:IPR000795
INTERPRO:IPR009000
INTERPRO:IPR009001
PFSCAN:PS51722
PRINTS:PR00315
PFAM:PF00009
SUPERFAMILY:SSF50447
SCANPROSITE:PS01159
HMMPANTHER:PTHR43721:SF2
HMMPANTHER:PTHR43721
SCANPROSITE:PS00301
PFAM:PF03144
INTERPRO:IPR004161
PFAM:PF09324
INTERPRO:IPR015403