WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP53006 Name  Ppa-DCR-1
Molecular Weight (kDa)  216.2 Length  1898
Organism  Pristionchus pacificus MD5 Checksum  756c66b0a87b91419821f77ccff534d1
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1898
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA06890 PPA06890   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

34 Motifs

WormBase ID
INTERPRO:IPR027417
SUPERFAMILY:SSF52540
INTERPRO:IPR036085
PFAM:PF02170
SUPERFAMILY:SSF101690
INTERPRO:IPR003100
PFSCAN:PS50821
SMART:SM00949
PFSCAN:PS50137
SMART:SM00358
INTERPRO:IPR014720
INTERPRO:IPR014001
SMART:SM00490
SMART:SM00487
PFAM:PF00271
INTERPRO:IPR001650
PFSCAN:PS51194
PFSCAN:PS51192
SUPERFAMILY:SSF54768
INTERPRO:IPR036389
SUPERFAMILY:SSF69065
PFSCAN:PS50142
SMART:SM00535
SCANPROSITE:PS00517
PFAM:PF00636
INTERPRO:IPR000999
PFAM:PF04851
INTERPRO:IPR006935
INTERPRO:IPR005034
HMMPANTHER:PTHR14950