WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Protein :

WormBase ID  ? PP69039 Name  Ppa-NPRT-1
Molecular Weight (kDa)  170.2 Length  1539
Organism  Pristionchus pacificus MD5 Checksum  7eff6bdade8dca8aa6e08cdfbed7fa2a
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1 Organism

Name Taxon Id
Pristionchus pacificus 54126

Proteins

1 Sequence

Length
1539
 

Other

0 Synonyms

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:PPA13563 PPA13563   [unknown]

2 Data Sets

Name URL
WormBaseAcedbConverter  
WormBase P. pacificus protein sequence (Fasta)  

28 Motifs

WormBase ID
SUPERFAMILY:SSF50729
INTERPRO:IPR011993
SCANPROSITE:PS00028
SMART:SM00355
INTERPRO:IPR013087
SMART:SM00461
PFSCAN:PS50229
INTERPRO:IPR000697
PFAM:PF00568
INTERPRO:IPR036936
HMMPANTHER:PTHR11098
SUPERFAMILY:SSF51690
INTERPRO:IPR036068
PFAM:PF17767
SUPERFAMILY:SSF54675
INTERPRO:IPR040727
INTERPRO:IPR007229
PFSCAN:PS51082
PFAM:PF02205
SMART:SM00246
INTERPRO:IPR003124
INTERPRO:IPR006405
PFAM:PF04095
PFAM:PF17956
INTERPRO:IPR041525
INTERPRO:IPR041619
HMMPANTHER:PTHR11098:SF1
TIGRFAM:TIGR01513